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Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe

Published: Nov 27, 2025 by Ivy · This post may contain affiliate links · Leave a Comment

Jump to Recipe· 4.3 from 53 reviews

If you’re searching for a comforting yet healthy twist on classic tuna casserole, the Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe is about to become your new favorite. This dish cleverly uses spaghetti squash as a delightful base, combining it with creamy coconut milk and tender tuna, all topped with crispy, nutty crackers for that perfect crunch. It’s a vibrant and satisfying meal that balances rich flavors and wholesome ingredients in a way that’s both nourishing and downright delicious.

Ingredients You'll Need

Two halved yellow spaghetti squash shells sit side by side on a white marbled surface, each filled with a layered mixture. The bottom layer inside the shells is a soft, pale yellow squash flesh with a slightly creamy texture. On top of that is a mix of green peas and small diced vegetables, giving a hint of green and light brown colors. The top layer is crumbled tofu or a similar light beige topping, sprinkled with chopped fresh green herbs. Small scattered herbs also decorate the white marbled background around the squash halves. photo taken with an iphone --ar 4:5 --v 7

Gathering the right ingredients is key to making a memorable Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe. Each component plays an essential role, from the creamy texture provided by coconut milk to the earthy depth of mushrooms and the subtle kick from spices, creating a well-rounded dish full of character.

  • 2 5 oz cans tuna (drained): Your main protein that keeps the casserole hearty and flavorful.
  • 1 tablespoon olive oil: Adds richness and helps sauté the vegetables evenly.
  • 1 13.5 oz can coconut milk (regular or lite): Provides creamy consistency and a hint of sweetness that complements the tuna perfectly.
  • 1 large yellow onion (chopped): Offers a savory base with subtle sweetness when cooked.
  • 2 cloves garlic (minced): Infuses a fragrant warmth that wakes up the palate.
  • 2 cups sliced baby bella mushrooms: Adds earthiness and a meaty texture that enhances the casserole.
  • ½ teaspoon pepper (plus more to taste): Delivers a gentle heat to balance flavors.
  • 1 teaspoon sea salt (plus more to taste): Essential for bringing out the natural flavors of every ingredient.
  • 1 medium-large spaghetti squash: The star vegetable that replaces traditional pasta with its unique, spaghetti-like strands.
  • 1 cup frozen peas (thawed): Adds a pop of color and a subtle sweetness to brighten the dish.
  • ¼ teaspoon cayenne pepper (optional): For those who love a touch of spice to awaken the casserole.
  • Pinch of nutmeg: A secret spice that imparts warmth and depth to the sauce.
  • ½ cup crushed sprouted seed or almond flour crackers: Provides the unbeatable crunchy topping that makes each bite irresistible.
  • Parsley (for garnish): Freshens the presentation and adds a vibrant herbal note.

How to Make Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe

Step 1: Roast the Spaghetti Squash

Begin by preheating your oven to 350°F. Cut the spaghetti squash in half lengthwise and scoop out the seeds. Lightly coat the inside with olive oil, then place each half cut side down on a baking sheet. Roast for 40 to 50 minutes until the flesh is tender and easily pierced with a fork. This step transforms the squash into those delightful strands that mimic pasta, setting the foundation for your casserole.

Step 2: Sauté Onion and Garlic

While the squash roasts, heat olive oil in a medium pot over medium-high heat. Add chopped onions, minced garlic, sea salt, pepper, optional cayenne, and nutmeg. Cook, stirring often, until the onions give off a wonderful aroma and turn translucent, about 10 minutes. This step builds the fragrant base of your sauce, teasing the senses with its savory bouquet.

Step 3: Cook the Mushrooms

Toss in the sliced baby bella mushrooms and continue cooking until the onions begin to brown and mushrooms soften. This deepens the flavor dramatically, adding earthiness that complements the lighter seafood flavors of the tuna.

Step 4: Simmer the Coconut Milk Sauce

Pour in the coconut milk and raise the heat to medium-high. Let the mixture reduce by half, stirring frequently to avoid sticking, which should take around 15 to 20 minutes. When it thickens to a gravy-like consistency, remove from heat. Stir in thawed peas and drained tuna—this melding of flavors is creamy, nutritious, and perfectly balanced.

Step 5: Prepare the Spaghetti Squash Strands

Once your squash has cooled for about 5 to 10 minutes, run a fork through the flesh to scrape out the spaghetti-like strands. If you notice liquid pooling, place the strands in a fine-mesh colander and press gently to remove excess moisture. This keeps your casserole from becoming watery and ensures the sauce clings beautifully to the strands.

Step 6: Combine and Season

Gently fold the drained squash strands into the coconut milk and tuna sauce. Taste and adjust seasonings with more salt and pepper if needed. This blending step is where everything comes together into a harmonious medley of flavors and textures.

Step 7: Assemble the Casserole

Divide the mixture evenly into the hollowed spaghetti squash shells. Sprinkle the top of each with a generous ¼ cup of crushed crackers, which will bake into a golden, crunchy crust that provides contrast to the creamy interior.

Step 8: Final Bake

Increase the oven temperature to 375°F and bake the casserole for about 10 minutes, just until heated through and the cracker topping turns a lovely golden brown. This baking step seals in warmth and adds that irresistible crispy finish.

Step 9: Garnish and Serve

Take the casserole out of the oven and sprinkle fresh parsley over the top for a fresh burst of color and flavor. Then, serve immediately while it’s warm and inviting.

How to Serve Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe

A white plate holds a roasted spaghetti squash shell, golden yellow and slightly crisp on the edges, filled with a layered mix of beige chicken pieces, bright green peas, fresh green herbs, and light-colored crumbled topping. A gold fork held by a woman's hand lifts a forkful of the mixed stuffing, showing a soft, textured mix with scattered green peas and herbal bits. The background is a white marbled surface, giving a clean and bright look. photo taken with an iphone --ar 4:5 --v 7

Garnishes

Fresh parsley is a classic choice that adds brightness and a touch of color, but feel free to experiment with a squeeze of fresh lemon juice or a sprinkle of grated Parmesan for an extra layer of flavor. These simple garnishes elevate the dish both visually and in taste.

Side Dishes

This casserole is hearty on its own, but pairing it with a crisp green salad dressed in a light vinaigrette or some roasted seasonal vegetables brings balance and additional nutrients to your meal. Steamed asparagus or a crunchy coleslaw also work beautifully alongside to cut through the creamy richness.

Creative Ways to Present

For a charming twist, serve the casserole right inside the roasted spaghetti squash shells at the table—nothing beats their rustic appeal! Alternatively, scoop the casserole into individual gratin dishes for an elegant presentation perfect for dinner parties or special occasions.

Make Ahead and Storage

Storing Leftovers

Store any leftover Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe in an airtight container in the refrigerator for up to 3 days. To maintain the cracker topping’s crunch, you might want to store it separately and add it right before reheating.

Freezing

This casserole freezes beautifully. For best results, freeze the prepared casserole without the cracker topping, and store it in a freezer-safe container for up to 2 months. Add fresh crushed crackers when reheating to keep that satisfying crunch intact.

Reheating

Reheat leftovers gently in the oven at 350°F until warmed through—usually about 15-20 minutes. Avoid microwaving to preserve the texture, especially if topping it again with crackers to regain that delightful golden crust.

FAQs

Can I use fresh tuna instead of canned tuna?

For this dish, canned tuna works best due to its convenient texture and flavor profile. Fresh tuna would require additional preparation and could alter the casserole’s consistency, but if you prefer fresh, consider lightly poaching or searing it before flaking into the sauce.

Is it possible to make this casserole vegan?

Yes! Swap the tuna for chickpeas or a firm tofu crumble and ensure your crackers are vegan-friendly. The coconut milk base already lends a creamy, dairy-free texture that is perfect for a plant-based version.

What type of crackers work best for the topping?

Nut-based or sprouted seed crackers are ideal because they crumble nicely and add a nutty crunch that complements the casserole’s flavors. Almond flour crackers are fantastic if you want a gluten-free option with great texture.

Can I prepare parts of this recipe in advance?

Absolutely! You can roast and scrape the spaghetti squash a day ahead and store the strands in the fridge. The sauce also holds well for a day or two, so assembling the casserole just before baking saves time.

How spicy is this casserole with cayenne pepper?

The ¼ teaspoon of cayenne adds just a gentle hint of heat that enhances the dish without overwhelming it. If you prefer your food milder or spicier, feel free to adjust the amount or omit it altogether.

Final Thoughts

This Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe is a true gem that brings comfort food into the wholesome era with creativity and heart. It’s perfect for weeknight dinners when you want something nourishing but exciting to eat. Trust me, once you try this casserole, it will quickly become one of those beloved dishes you want to make again and again!

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Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe

Spaghetti Squash Tuna Casserole with Coconut Milk and Crackers Recipe

5 Stars 4 Stars 3 Stars 2 Stars 1 Star 4.3 from 53 reviews
  • Author: Ivy
  • Prep Time: 15 minutes
  • Cook Time: 1 hour
  • Total Time: 1 hour 15 minutes
  • Yield: 4 servings
  • Category: Main Course
  • Method: Baking
  • Cuisine: American
  • Diet: Gluten Free
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Description

This Spaghetti Squash Tuna Casserole is a comforting, low-carb twist on a classic tuna casserole, featuring tender roasted spaghetti squash strands mixed with a creamy coconut milk sauce, sautéed mushrooms, peas, and seasoned tuna. Topped with crunchy sprouted seed or almond flour cracker crumbs and baked to golden perfection, this dish offers a flavorful, gluten-free alternative that's perfect for a wholesome weeknight dinner.


Ingredients

Squash

  • 1 medium-large spaghetti squash
  • 1 tablespoon olive oil (for coating squash)

Sauce and Filling

  • 2 (5 oz) cans tuna, drained
  • 1 tablespoon olive oil
  • 1 large yellow onion, chopped
  • 2 cloves garlic, minced
  • 2 cups sliced baby bella mushrooms
  • ½ teaspoon pepper (plus more to taste)
  • 1 teaspoon sea salt (plus more to taste)
  • ¼ teaspoon cayenne pepper (optional)
  • pinch of nutmeg
  • 1 (13.5 oz) can coconut milk (regular or lite)
  • 1 cup frozen peas, thawed

Topping

  • ½ cup crushed sprouted seed or almond flour crackers
  • Parsley, for garnish


Instructions

  1. Prep and Roast Spaghetti Squash: Preheat your oven to 350°F. Cut the spaghetti squash in half lengthwise and scoop out the seeds. Lightly coat the inside of each half with olive oil. Place the halves cut side down on a baking sheet and bake for 40-50 minutes, or until a fork pierces the squash easily.
  2. Cook Aromatics: While the squash roasts, heat 1 tablespoon olive oil in a medium pot over medium-high heat. Add chopped onion, minced garlic, salt, pepper, cayenne pepper (if using), and nutmeg. Stir frequently and cook for about 10 minutes until the onion and garlic become translucent and fragrant.
  3. Sauté Mushrooms: Add sliced baby bella mushrooms to the pot and cook until the onions begin to brown slightly and the mushrooms soften.
  4. Reduce Sauce: Pour in the coconut milk and continue cooking over medium-high heat, stirring often, until the sauce reduces by half and thickens to a gravy-like consistency, approximately 15-20 minutes. Remove from heat once done.
  5. Add Peas and Tuna: Stir in the thawed peas and drained tuna, mixing well to combine all flavors.
  6. Prepare Squash Strands: Once the spaghetti squash is done, remove from oven and let it cool for 5-10 minutes. Use a fork to scrape out the spaghetti-like strands from the flesh.
  7. Drain Excess Liquid: If the squash strands seem watery, place them in a fine-mesh colander to drain excess liquid. Press down gently with a fork or spatula to remove as much liquid as possible.
  8. Combine Squash with Sauce: Add the drained squash strands into the sauce mixture and toss everything together. Taste and adjust salt and pepper as needed.
  9. Assemble and Top: Spoon the spaghetti squash and tuna mixture evenly into each hollowed squash half. Sprinkle each with about ¼ cup of crushed crackers on top.
  10. Bake to Finish: Increase the oven temperature to 375°F. Bake the assembled casseroles for 10 minutes, or until heated through and the cracker topping is lightly golden.
  11. Garnish and Serve: Remove the casserole from the oven, sprinkle with fresh parsley, and serve warm.

Notes

  • If you prefer a less spicy casserole, omit the cayenne pepper.
  • Using sprouted seed or almond flour crackers keeps this casserole gluten-free and adds extra crunch.
  • Be sure to drain the cooked spaghetti squash well to prevent a soggy casserole.
  • You can substitute frozen peas with fresh peas if available.
  • For a lighter option, use lite coconut milk.

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Hey, I’m Ivy!

I’m a 28-year-old mom to my little prince, Pitter, who loves cooking and exploring flavors from around the world. What started in my home kitchen is now a space where I share simple, global-inspired recipes made with love.

 

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